| 1. |
Guzzi N et al: Pseudouridylation of tRNA-Derived
Fragments Steers Translational Control in Stem Cells. Cell 2018,
173(5):1204-1216 e1226.[PMID: 29628141]
|
| 2. |
Keam SP et al: The human Piwi protein Hiwi2 associates
with tRNA-derived piRNAs in somatic cells. Nucleic Acids Res 2014,
42(14):8984-8995.[PMID: 25038252]
|
| 3. |
Keam SP, Sobala A, Ten Have S, Hutvagner G:
tRNA-Derived RNA Fragments Associate with Human Multisynthetase Complex (MSC)
and Modulate Ribosomal Protein Translation. J Proteome Res 2017,
16(2):413-420.[PMID: 27936807]
|
| 4. |
Zhang X et al: IL-4 Inhibits the Biogenesis of an
Epigenetically Suppressive PIWI-Interacting RNA To Upregulate CD1a Molecules on
Monocytes/Dendritic Cells. J Immunol 2016, 196(4):1591-1603.[PMID: 26755820]
|
| 5. |
Honda S et al: The biogenesis pathway of tRNA-derived
piRNAs in Bombyx germ cells. Nucleic Acids Res 2017, 45(15):9108-9120.[PMID:
28645172]
|
| 6. |
Cole C et al: Filtering of deep sequencing data
reveals the existence of abundant Dicer-dependent small RNAs derived from
tRNAs. RNA 2009, 15(12):2147-2160.[PMID: 19850906]
|
| 7. |
Sobala A, Hutvagner G: Small RNAs derived from the 5'
end of tRNA can inhibit protein translation in human cells. RNA Biol 2013,
10(4):553-563.[PMID: 23563448]
|
| 8. |
Lee YS, Shibata Y, Malhotra A, Dutta A: A novel class
of small RNAs: tRNA-derived RNA fragments (tRFs). Genes Dev 2009,
23(22):2639-2649.[PMID: 19933153]
|
| 9. |
Huang B et al: tRF/miR-1280 Suppresses Stem Cell-like
Cells and Metastasis in Colorectal Cancer. Cancer Res 2017,
77(12):3194-3206.[PMID: 28446464]
|
| 10. |
Kuscu C et al: tRNA fragments (tRFs) guide Ago to
regulate gene expression post-transcriptionally in a Dicer-independent manner.
RNA 2018, 24(8):1093-1105.[PMID: 29844106]
|
| 11. |
Kim HK et al: A transfer-RNA-derived small RNA
regulates ribosome biogenesis. Nature 2017, 552(7683):57-62.[PMID: 29186115]
|
| 12. |
Kim HK et al: A tRNA-Derived Small RNA Regulates
Ribosomal Protein S28 Protein Levels after Translation Initiation in Humans and
Mice. Cell Rep 2019, 29(12):3816-3824 e3814.[PMID: 31851915]
|
| 13. |
Yeung ML et al: Pyrosequencing of small non-coding
RNAs in HIV-1 infected cells: evidence for the processing of a viral-cellular
double-stranded RNA hybrid. Nucleic Acids Res 2009, 37(19):6575-6586.[PMID:
19729508]
|
| 14. |
Schorn AJ, Gutbrod MJ, LeBlanc C, Martienssen R:
LTR-Retrotransposon Control by tRNA-Derived Small RNAs. Cell 2017, 170(1):61-71
e11.[PMID: 28666125]
|
| 15. |
Maute RL et al: tRNA-derived microRNA modulates
proliferation and the DNA damage response and is down-regulated in B cell
lymphoma. Proc Natl Acad Sci U S A 2013, 110(4):1404-1409.[PMID: 23297232]
|
| 16. |
Ruggero K et al: Small noncoding RNAs in cells
transformed by human T-cell leukemia virus type 1: a role for a tRNA fragment
as a primer for reverse transcriptase. J Virol 2014, 88(7):3612-3622.[PMID:
24403582]
|
| 17. |
Falconi M et al: A novel 3'-tRNA(Glu)-derived fragment
acts as a tumor-suppressor in breast cancer by targeting nucleolin. FASEB J
2019:fj201900382RR.[PMID: 31560576]
|
| 18. |
Zhou K et al: A tRNA fragment, tRF5-Glu, regulates
BCAR3 expression and proliferation in ovarian cancer cells. Oncotarget 2017,
8(56):95377-95391.[PMID: 29221134]
|
| 19. |
Goodarzi H et al: Endogenous tRNA-Derived Fragments
Suppress Breast Cancer Progression via YBX1 Displacement. Cell 2015,
161(4):790-802.[PMID: 25957686]
|
| 20. |
Natt D et al: Human sperm displays rapid responses to
diet. PLoS Biol 2019, 17(12):e3000559.[PMID: 31877125]
|
| 21. |
Veneziano D et al: Dysregulation of different classes
of tRNA fragments in chronic lymphocytic leukemia. Proc Natl Acad Sci U S A
2019, 116(48):24252-24258.[PMID: 31723042]
|
| 22. |
Haussecker D et al: Human tRNA-derived small RNAs in
the global regulation of RNA silencing. RNA 2010, 16(4):673-695.[PMID:
20181738]
|
| 23. |
Balatti V et al: tsRNA signatures in cancer. Proc Natl
Acad Sci U S A 2017, 114(30):8071-8076.[PMID: 28696308]
|
| 24. |
Cho H et al: Regulation of La/SSB-dependent viral gene
expression by pre-tRNA 3' trailer-derived tRNA fragments. Nucleic Acids Res
2019, 47(18):9888-9901.[PMID: 31504775]
|
| 25. |
Babiarz JE et al: Mouse ES cells express endogenous
shRNAs, siRNAs, and other Microprocessor-independent, Dicer-dependent small
RNAs. Genes Dev 2008, 22(20):2773-2785.[PMID: 18923076]
|
| 26. |
Hasler D et al: The Lupus Autoantigen La Prevents
Mis-channeling of tRNA Fragments into the Human MicroRNA Pathway. Mol Cell
2016, 63(1):110-124.[PMID: 27345152]
|
| 27. |
Pekarsky Y et al: Dysregulation of a family of short
noncoding RNAs, tsRNAs, in human cancer. Proc Natl Acad Sci U S A 2016,
113(18):5071-5076.[PMID: 27071132]
|
| 28. |
Liao JY et al: Deep sequencing of human nuclear and
cytoplasmic small RNAs reveals an unexpectedly complex subcellular distribution
of miRNAs and tRNA 3' trailers. PLoS One 2010, 5(5):e10563.[PMID: 20498841]
|
| 29. |
La Ferlita A et al: Identification of tRNA-derived
ncRNAs in TCGA and NCI-60 panel cell lines and development of the public
database tRFexplorer. Database (Oxford) 2019, 2019.[PMID: 31735953]
|
| 30. |
Honda S et al: Sex hormone-dependent tRNA halves
enhance cell proliferation in breast and prostate cancers. Proc Natl Acad Sci U
S A 2015, 112(29):E3816-3825.[PMID: 26124144]
|
| 31. |
Donovan J, Rath S, Kolet-Mandrikov D, Korennykh A:
Rapid RNase L-driven arrest of protein synthesis in the dsRNA response without
degradation of translation machinery. RNA 2017, 23(11):1660-1671.[PMID:
28808124]
|
| 32. |
Hanada T et al: CLP1 links tRNA metabolism to
progressive motor-neuron loss. Nature 2013, 495(7442):474-480.[PMID: 23474986]
|
| 33. |
Saikia M et al: Angiogenin-cleaved tRNA halves
interact with cytochrome c, protecting cells from apoptosis during osmotic
stress. Mol Cell Biol 2014, 34(13):2450-2463.[PMID: 24752898]
|
| 34. |
Wang Q et al: Identification and functional
characterization of tRNA-derived RNA fragments (tRFs) in respiratory syncytial
virus infection. Mol Ther 2013, 21(2):368-379.[PMID: 23183536]
|
| 35. |
Deng J et al: Respiratory Syncytial Virus Utilizes a
tRNA Fragment to Suppress Antiviral Responses Through a Novel Targeting
Mechanism. Mol Ther 2015, 23(10):1622-1629.[PMID: 26156244]
|
| 36. |
Zhou J et al: Identification of two novel functional
tRNA-derived fragments induced in response to respiratory syncytial virus
infection. J Gen Virol 2017, 98(7):1600-1610.[PMID: 28708049]
|
| 37. |
Yang X et al: 5-methylcytosine promotes mRNA export -
NSUN2 as the methyltransferase and ALYREF as an m(5)C reader. Cell Res 2017,
27(5):606-625.[PMID: 28418038]
|
| 38. |
Ivanov P et al: Angiogenin-induced tRNA fragments
inhibit translation initiation. Mol Cell 2011, 43(4):613-623.[PMID: 21855800]
|
| 39. |
Ivanov P et al: G-quadruplex structures contribute to
the neuroprotective effects of angiogenin-induced tRNA fragments. Proc Natl
Acad Sci U S A 2014, 111(51):18201-18206.[PMID: 25404306]
|
| 40. |
Schaffer AE et al: CLP1 founder mutation links tRNA
splicing and maturation to cerebellar development and neurodegeneration. Cell
2014, 157(3):651-663.[PMID: 24766810]
|
| 41. |
Francisco et al: Biogenesis of Y RNA-derived small
RNAs is independent of the microRNA pathway. FEBS Letters, Volume 586, Issue 8,
2012,Pages 1226-1230.
|
| 42. |
Billmeier et al: Mechanistic insights into non-coding
Y RNA processing. RNA Biology,2022, 19(1), 468–480.
|
| 43. |
Gal Nechooshtan et al: Processing by RNase 1 forms
tRNA halves and distinct Y RNA fragments in the extracellular environment.
Nucleic Acids Research, 2020,Volume 48, Issue 14, Pages 8035–8049.
|
| 44. |
Darja Elzer et al: Human sperm heads harbor modified
YsRNA as transgenerationally inherited non-coding RNAs. Frontiers in Genetics,
2023, Sec. RNA Volume 14.
|
| 45. |
Venetia Pliatsika et al: MINRbase: a comprehensive
database of nuclear- and mitochondrial-ribosomal-RNA-derived fragments (rRFs),
Nucleic Acids Research, 2024, Volume 52, Issue D1, Pages D229–D238.
|
| 46. |
Coley AB et al. Small Nucleolar Derived RNAs as
Regulators of Human Cancer. Biomedicines. 2022; 10(8):1819.
|
| 47. |
Coley AB et al: MicroRNA-like snoRNA-Derived RNAs
(sdRNAs) Promote Castration-Resistant Prostate Cancer. Cells. 2022; 11(8):1302.
|
| 48. |
Yang Shi et al: Dicer-independent snRNA/snoRNA-derived
nuclear RNA 3 regulates tumor-associated macrophage function by epigenetically
repressing inducible nitric oxide synthase transcription. Cancer
Communications, February 2021,Volume41,Issue2,Pages 140-153.
|
| 49. |
Ken Nakatsu et al: sRNAfrag: a pipeline and suite of
tools to analyze fragmentation in small RNA sequencing data. Briefings in
Bioinformatics, January 2024, Volume 25, Issue 1, bbad515.
|
GlycoRNA Array 受託解析サービス
